VectorBase
From Infogalactic: the planetary knowledge core
VectorBase [1][2] is one of the five Bioinformatics Resource Centers (BRC) funded by the National Institutes of Allergy and Infectious Diseases, NIAID a component of the National Institutes of Health (NIH), which is an agency of the United States Department of Health and Human Services. VectorBase is focused on invertebrate vectors of human pathogens working with the sequencing centers and the research community to curate vector genomes (mainly genome annotation).
Contents
Genomes covered in the VectorBase database
- Aedes aegypti[3]
- Anopheles gambiae[4]
- Culex quinquefasciatus
- Ixodes scapularis
- Pediculus humanus
- Rhodnius prolixus
Tools available through the VectorBase site
- Genome browser
- Community annotation system
- Microarray and gene expression repository
- Controlled vocabularies for anatomy,[5] insecticide resistance and vector-borne diseases (malaria and dengue fever)
- BLAST searches for all covered genomes
See also
References
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External links
- Bioinformatics Resource Centers The NIAID page describing the goals and activities of the BRCs
- Pathogen Portal Hub site for the five BRCs; provides summary information
- VectorBase genome browsers
- Aedes aegypti genome browser at VectorBase
- Anopheles gambiae genome browser at VectorBase
- Culex quinquefasciatus genome browser at VectorBase
- Ixodes scapularis genome browser at VectorBase
- Pediculus humanus genome browser at VectorBase
- Rhodnius prolixus genome browser at VectorBase
